|
sequence-specific DNA binding
Related concepts
#
|
Concept name
|
Type
|
Relation
|
Support
|
Score
|
1
|
transcription factor activity
|
Function
|
Inferred
|
Explain
|
0.12889
|
2
|
Homeobox
|
Domain
|
Known
|
Explain
|
0.09716
|
3
|
regulation of transcription, DNA-dependent
|
Function
|
Inferred
|
Explain
|
0.08233
|
4
|
Homeodomain-related
|
Domain
|
Inferred
|
Explain
|
0.07437
|
5
|
Homeobox, conserved site
|
Domain
|
Known
|
Explain
|
0.06856
|
6
|
Homeodomain-like
|
Domain
|
Inferred
|
Explain
|
0.06376
|
7
|
transcription regulator activity
|
Function
|
Inferred
|
Explain
|
0.05494
|
8
|
Cell Nucleus
|
Component
|
Inferred
|
Explain
|
0.04412
|
9
|
Translin
|
Domain
|
Known
|
Explain
|
0.03440
|
10
|
Translin, N-terminal
|
Domain
|
Known
|
Explain
|
0.02484
|
11
|
Translin, C-terminal
|
Domain
|
Known
|
Explain
|
0.02484
|
12
|
Ets
|
Domain
|
Known
|
Explain
|
0.02448
|
13
|
TSN gene
|
Gene
|
Known
|
Explain
|
0.02393
|
14
|
transcription, DNA-dependent
|
Function
|
Inferred
|
Explain
|
0.02181
|
15
|
replication fork barrier binding
|
Function
|
Known
|
Explain
|
0.02126
|
16
|
Helix-turn-helix, AraC type, subdomain 2
|
Domain
|
Known
|
Explain
|
0.02067
|
17
|
Transcription regulator, AsnC-type
|
Domain
|
Known
|
Explain
|
0.02052
|
18
|
Basic-leucine zipper (bZIP) transcription factor
|
Domain
|
Known
|
Explain
|
0.02038
|
19
|
TSNAX gene
|
Gene
|
Known
|
Explain
|
0.02025
|
20
|
rDNA binding
|
Function
|
Known
|
Explain
|
0.01999
|
21
|
multicellular organismal development
|
Function
|
Inferred
|
Explain
|
0.01872
|
22
|
Transcription regulator, AsnC-type, HTH domain, conserved site
|
Domain
|
Known
|
Explain
|
0.01853
|
23
|
Transcription regulator, AsnC-type, HTH domain
|
Domain
|
Known
|
Explain
|
0.01816
|
24
|
Helix-turn-helix motif, lambda-like repressor
|
Domain
|
Inferred
|
Explain
|
0.01793
|
25
|
Helix-turn-helix, AraC domain
|
Domain
|
Known
|
Explain
|
0.01708
|
26
|
Homeobox, region
|
Domain
|
Inferred
|
Explain
|
0.01620
|
27
|
Transcription factor CBF/NF-Y/archaeal histone
|
Domain
|
Known
|
Explain
|
0.01619
|
28
|
Transcription factor, NFYB/HAP3, conserved site
|
Domain
|
Known
|
Explain
|
0.01583
|
29
|
rDNA spacer replication fork barrier binding
|
Function
|
Inferred
|
Explain
|
0.01560
|
30
|
Helix-turn-helix, AraC
|
Domain
|
Known
|
Explain
|
0.01555
|
31
|
Trp repressor/replication initiator
|
Domain
|
Known
|
Explain
|
0.01435
|
32
|
DUX4 gene
|
Gene
|
Known
|
Explain
|
0.01427
|
33
|
bZIP transcription factor, bZIP-1
|
Domain
|
Known
|
Explain
|
0.01389
|
34
|
Chromosomal replication initiator, DnaA C-terminal
|
Domain
|
Known
|
Explain
|
0.01386
|
35
|
HSF5 gene
|
Gene
|
Known
|
Explain
|
0.01367
|
36
|
MEIS1 gene
|
Gene
|
Known
|
Explain
|
0.01360
|
37
|
DNA-binding WRKY
|
Domain
|
Known
|
Explain
|
0.01344
|
38
|
Heat shock factor (HSF)-type, DNA-binding
|
Domain
|
Known
|
Explain
|
0.01306
|
39
|
TPRX1 gene
|
Gene
|
Known
|
Explain
|
0.01293
|
40
|
Sterile alpha motif/pointed
|
Domain
|
Known
|
Explain
|
0.01289
|
41
|
FOXD4L3 gene
|
Gene
|
Known
|
Explain
|
0.01288
|
42
|
TGIF2LX gene
|
Gene
|
Known
|
Explain
|
0.01288
|
43
|
MEIS3P2 gene
|
Gene
|
Known
|
Explain
|
0.01288
|
44
|
Transcription regulator, AsnC-type, C-terminal
|
Domain
|
Known
|
Explain
|
0.01286
|
45
|
DUX3 gene
|
Gene
|
Known
|
Explain
|
0.01282
|
46
|
DUXA gene
|
Gene
|
Known
|
Explain
|
0.01282
|
47
|
ETV3L gene
|
Gene
|
Known
|
Explain
|
0.01281
|
48
|
DUX2 gene
|
Gene
|
Known
|
Explain
|
0.01280
|
49
|
LBX2 gene
|
Gene
|
Known
|
Explain
|
0.01280
|
50
|
DBX2 gene
|
Gene
|
Known
|
Explain
|
0.01271
|
51
|
DUX5 gene
|
Gene
|
Known
|
Explain
|
0.01269
|
52
|
ARGFX gene
|
Gene
|
Known
|
Explain
|
0.01263
|
53
|
DPRX gene
|
Gene
|
Known
|
Explain
|
0.01263
|
54
|
LEUTX gene
|
Gene
|
Known
|
Explain
|
0.01263
|
55
|
Basic leucine zipper
|
Domain
|
Known
|
Explain
|
0.01260
|
56
|
Transcription activator, mating-type protein ALPHA1
|
Domain
|
Known
|
Explain
|
0.01255
|
57
|
NANOGP8 gene
|
Gene
|
Known
|
Explain
|
0.01248
|
58
|
NANOGP1 gene
|
Gene
|
Known
|
Explain
|
0.01248
|
59
|
NKX6-3 gene
|
Gene
|
Known
|
Explain
|
0.01248
|
60
|
RHOXF2B gene
|
Gene
|
Known
|
Explain
|
0.01248
|
61
|
IRX6 gene
|
Gene
|
Known
|
Explain
|
0.01235
|
62
|
DBX1 gene
|
Gene
|
Known
|
Explain
|
0.01231
|
63
|
DUX1 gene
|
Gene
|
Known
|
Explain
|
0.01223
|
64
|
TGIF2LY gene
|
Gene
|
Known
|
Explain
|
0.01217
|
65
|
MEIS3P1 gene
|
Gene
|
Known
|
Explain
|
0.01213
|
66
|
HSFY2 gene
|
Gene
|
Known
|
Explain
|
0.01210
|
67
|
HSFX2 gene
|
Gene
|
Known
|
Explain
|
0.01210
|
68
|
POU5F2 gene
|
Gene
|
Known
|
Explain
|
0.01210
|
69
|
POU5F1B gene
|
Gene
|
Known
|
Explain
|
0.01204
|
70
|
DRGX gene
|
Gene
|
Known
|
Explain
|
0.01199
|
71
|
TEF gene
|
Gene
|
Known
|
Explain
|
0.01194
|
72
|
HOXC12 gene
|
Gene
|
Known
|
Explain
|
0.01191
|
73
|
NKX1-2 gene
|
Gene
|
Known
|
Explain
|
0.01191
|
74
|
MEIS3 gene
|
Gene
|
Known
|
Explain
|
0.01181
|
75
|
GBX1 gene
|
Gene
|
Known
|
Explain
|
0.01172
|
76
|
C5orf41 gene
|
Gene
|
Known
|
Explain
|
0.01171
|
77
|
HOMEZ gene
|
Gene
|
Known
|
Explain
|
0.01155
|
78
|
ETV2 gene
|
Gene
|
Known
|
Explain
|
0.01154
|
79
|
DBP gene
|
Gene
|
Known
|
Explain
|
0.01152
|
80
|
ISX gene
|
Gene
|
Known
|
Explain
|
0.01149
|
81
|
ONECUT3 gene
|
Gene
|
Known
|
Explain
|
0.01145
|
82
|
SPIC gene
|
Gene
|
Known
|
Explain
|
0.01139
|
83
|
Transcription factor, MADS-box
|
Domain
|
Known
|
Explain
|
0.01133
|
84
|
unmethylated CpG binding
|
Function
|
Known
|
Explain
|
0.01125
|
85
|
purine-rich negative regulatory element binding
|
Function
|
Known
|
Explain
|
0.01121
|
86
|
satellite DNA binding
|
Function
|
Known
|
Explain
|
0.01105
|
87
|
BATF2 gene
|
Gene
|
Known
|
Explain
|
0.01097
|
88
|
PROP1 gene
|
Gene
|
Known
|
Explain
|
0.01084
|
89
|
AT DNA binding
|
Function
|
Known
|
Explain
|
0.01081
|
90
|
VENTX gene
|
Gene
|
Known
|
Explain
|
0.01076
|
91
|
HOXA6 gene
|
Gene
|
Known
|
Explain
|
0.01068
|
92
|
GATAD1 gene
|
Gene
|
Known
|
Explain
|
0.01056
|
93
|
HLX gene
|
Gene
|
Known
|
Explain
|
0.01034
|
94
|
GSC2 gene
|
Gene
|
Known
|
Explain
|
0.01032
|
95
|
HMBOX1 gene
|
Gene
|
Known
|
Explain
|
0.01031
|
96
|
centromeric DNA binding
|
Function
|
Known
|
Explain
|
0.01023
|
97
|
anterior/posterior pattern formation
|
Function
|
Inferred
|
Explain
|
0.01021
|
98
|
ISL2 gene
|
Gene
|
Known
|
Explain
|
0.01020
|
99
|
Zinc finger, GATA-type
|
Domain
|
Known
|
Explain
|
0.01019
|
100
|
NKX1-1 gene
|
Gene
|
Known
|
Explain
|
0.01016
|
|