Protoplasm

Component • C0175996

Definition

Cell component which has as its direct parts a maximally connected part of cytoplasm and one or more cell nuclei. Examples: protoplasm of hepatocyte, sarcoplasm, protoplasm of megakaryocyte.

Synonyms

Protoplasm • Protoplasms • intracellular • internal to cell

Linked items?Related concepts, ordered by their global importance in the network.

GABARAPL1 gene    TNF gene    BCL2 gene    MAP1LC3B gene    SMAD2 gene    PIK3R1 gene    SMAD3 gene    CCND1 gene    PARP1 gene    BRCA1 gene    MDM2 gene    NR3C1 gene    HSP90AA1 gene    ARRB1 gene    RAC1 gene    SP1 gene    SMAD4 gene    BCL2L1 gene    CDC42 gene    CAV1 gene   

Related concepts

# Concept name Type Relation Support Score
1 zinc ion binding Function Inferred Explain 0.06455
2 structural constituent of ribosome activity Function Inferred Explain 0.06169
3 Ribosomes Component Inferred Explain 0.05922
4 Metal Ion Binding Function Inferred Explain 0.05308
5 Translation, Genetic Function Inferred Explain 0.04522
6 DNA Binding Function Inferred Explain 0.03970
7 regulation of transcription, DNA-dependent Function Inferred Explain 0.03762
8 Cell Nucleus Component Inferred Explain 0.03692
9 Zinc finger, C2H2-like Domain Known Explain 0.01434
10 Zinc finger, C2H2-type Domain Known Explain 0.01407
11 Transcriptional Regulation Function Inferred Explain 0.01362
12 Zinc finger, C2H2-type/integrase, DNA-binding Domain Inferred Explain 0.01107
13 Rab GTPase activator activity Function Inferred Explain 0.01040
14 regulation of Rab GTPase activity Function Inferred Explain 0.00993
15 GTPase activator activity Function Inferred Explain 0.00939
16 Krueppel-associated box Domain Known Explain 0.00844
17 transcription factor activity Function Inferred Explain 0.00720
18 Nucleic Acid Binding Function Inferred Explain 0.00709
19 regulation of small GTPase mediated signal transduction Function Inferred Explain 0.00686
20 Protein Binding Function Inferred Explain 0.00614
21 Cytoplasm Component Inferred Explain 0.00587
22 small GTPase mediated signal transduction Function Inferred Explain 0.00554
23 Cyclosporine Compound Inferred Explain 0.00521
24 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide Compound Inferred Explain 0.00486
25 Rho guanine nucleotide exchange factor activity Function Inferred Explain 0.00417
26 regulation of Rho protein signal transduction Function Inferred Explain 0.00396
27 Cytoplasmic matrix Component Inferred Explain 0.00344
28 Benzo(a)pyrene Compound Inferred Explain 0.00339
29 transcription, DNA-dependent Function Inferred Explain 0.00329
30 guanyl-nucleotide exchange factor activity Function Inferred Explain 0.00329
31 Viral life cycle Function Inferred Explain 0.00293
32 Vitamin E Compound Inferred Explain 0.00256
33 Ribosomal protein L19/L19e Domain Known Explain 0.00247
34 Selenium Compound Inferred Explain 0.00244
35 Ribosomal protein L37e, conserved site Domain Known Explain 0.00242
36 Signal Transduction Function Inferred Explain 0.00242
37 Ribosomal protein, zinc-binding Domain Known Explain 0.00239
38 GTP Binding Function Inferred Explain 0.00236
39 translational elongation Function Inferred Explain 0.00235
40 nucleotide binding Function Inferred Explain 0.00230
41 RabGAP/TBC Domain Known Explain 0.00227
42 RNA Binding Function Inferred Explain 0.00212
43 Ribosomal protein S17, conserved site Domain Known Explain 0.00205
44 Ribosomal protein S17 Domain Known Explain 0.00205
45 IPR021138 Domain Known Explain 0.00203
46 Tetrachlorodibenzodioxin Compound Inferred Explain 0.00200
47 IPR021137 Domain Known Explain 0.00199
48 Ribosomal protein L35, conserved site Domain Known Explain 0.00194
49 Selenite Compound Inferred Explain 0.00193
50 Ribosomal protein S6e, conserved site Domain Known Explain 0.00193
51 Ribosomal protein S11 Domain Known Explain 0.00190
52 Ribosomal protein L18/L5 Domain Known Explain 0.00190
53 Ribosomal protein L35 Domain Known Explain 0.00189
54 Ribosomal protein S6e Domain Known Explain 0.00188
55 Ribosomal protein S13, conserved site Domain Known Explain 0.00186
56 IPR020924 Domain Known Explain 0.00185
57 pirinixic acid Compound Inferred Explain 0.00184
58 Ribosomal protein L37ae/L37e, core Domain Known Explain 0.00182
59 Ribosomal protein S13 Domain Known Explain 0.00182
60 Calcium Valproate Compound Inferred Explain 0.00181
61 IPR020919 Domain Known Explain 0.00179
62 Ribosomal protein L3 Domain Known Explain 0.00175
63 Ribosomal protein S8e, conserved site Domain Known Explain 0.00175
64 Ribosomal protein S9, archaeal Domain Known Explain 0.00174
65 arsenic trioxide Compound Inferred Explain 0.00173
66 Ribosomal protein L2 Domain Known Explain 0.00173
67 Ribosomal protein L10 Domain Known Explain 0.00172
68 Ribosomal protein S9 Domain Known Explain 0.00170
69 Ribosomal protein S9, conserved site Domain Known Explain 0.00168
70 Ribosomal protein S8e Domain Known Explain 0.00168
71 Ribosomal protein S17, archaeal Domain Known Explain 0.00165
72 Ribosomal protein S17, bacterial-type Domain Known Explain 0.00165
73 Ribosomal protein L23/L15e, core Domain Known Explain 0.00163
74 Ribosomal protein S11, archaeal Domain Known Explain 0.00160
75 Ribosomal protein S11, bacterial-type Domain Known Explain 0.00160
76 Ribosomal protein L7/L12, oligomerisation Domain Known Explain 0.00160
77 calcium-dependent cysteine-type endopeptidase activity Function Inferred Explain 0.00159
78 Double-stranded RNA-binding-like Domain Known Explain 0.00158
79 Ribosomal protein L10e, conserved site Domain Known Explain 0.00157
80 IPR022671 Domain Known Explain 0.00156
81 Ribosomal protein L7/L12, C-terminal Domain Known Explain 0.00156
82 Ribosomal protein L29, conserved site Domain Known Explain 0.00155
83 Ribosomal protein L13e, conserved site Domain Known Explain 0.00155
84 Ribosomal protein L19, conserved site Domain Known Explain 0.00155
85 Ribosomal protein L27, conserved site Domain Known Explain 0.00155
86 Ribosomal protein L32e, conserved site Domain Known Explain 0.00155
87 Ribosomal protein L33, conserved site Domain Known Explain 0.00155
88 Ribosomal protein L35Ae, conserved site Domain Known Explain 0.00155
89 Ribosomal protein S14, conserved site Domain Known Explain 0.00155
90 Ribosomal protein S17e, conserved site Domain Known Explain 0.00155
91 Ribosomal protein S18, conserved site Domain Known Explain 0.00155
92 Ribosomal protein S19e, conserved site Domain Known Explain 0.00155
93 Ribosomal protein S21, conserved site Domain Known Explain 0.00155
94 Ribosomal protein S21e, conserved site Domain Known Explain 0.00155
95 Ribosomal protein L31e, conserved site Domain Known Explain 0.00155
96 Ribosomal protein L39e, conserved site Domain Known Explain 0.00155
97 Ribosomal protein S16, conserved site Domain Known Explain 0.00155
98 IPR020939 Domain Known Explain 0.00155
99 Ribosomal protein L7/L12 Domain Known Explain 0.00153
100 Ribosomal protein S13, archaeal Domain Known Explain 0.00152